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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7355849_7356892_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7355849 - 7356892

Intron Length:

1044

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATTTTCC

5'SS Class:

weak_major

3'SS Sequence:

GCACTGGAAACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GATTCCGTTACA

Flanking Amino Acid:

SQEQASLNTTSMYCTESDDP

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.1

63.4

35.5

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

49.8

-0

1.1

42.8

41.2

Minor 5ss

50.3

0.01

2.3

66.8

37.3

Minor BPS

52.1

0.06

2.3

69.26

42.4

Associated Gene:

Gene:

CA12

Ensembl Gene ID:

ENSAPLG00000003479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024627

7355481 - 7365258

9778