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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7357579_7359290_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7357579 - 7359290

Intron Length:

1712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGATAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATTACAG

Flanking Amino Acid:

GLAVLAILLEIGPFNPSYEK

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

72.1

34.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

83.1

0.74

0.8

76.8

30.4

Minor 5ss

36.8

-1.5

3.3

49.4

47.1

Minor BPS

49.5

-0.1

2.1

61.72

45.7

Associated Gene:

Gene:

CA12

Ensembl Gene ID:

ENSAPLG00000003479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017377

7355481 - 7363683

8203

ENSAPLT00000025138

7353940 - 7363818

9879

ENSAPLT00000043513

7355481 - 7366260

10780

ENSAPLT00000003569

7353908 - 7365967

12060

ENSAPLT00000025066

7355481 - 7363372

7892

ENSAPLT00000043209

7354162 - 7366730

12569

ENSAPLT00000024627

7355481 - 7365258

9778

ENSAPLT00000034412

7354672 - 7366146

11475

ENSAPLT00000022352

7355481 - 7366146

10666

ENSAPLT00000031712

7355481 - 7363468

7988