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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7363138_7365925_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7363138 - 7365925

Intron Length:

2788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTATTGATC

5'SS Class:

weak_major

3'SS Sequence:

AATAACTAGATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

GGGATAATAACT

Flanking Amino Acid:

LPHPHTVLYSLRLDKYASLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.4

0.1

1.1

56.4

40.6

Major BPS

70.1

0.5

70.3

31.9

Major PPT

49.9

-0

1.1

44.1

41.5

Minor 5ss

45.2

-0.5

3.1

65.8

39.6

Minor BPS

45.4

-0.2

1.9

60.56

42.2

Associated Gene:

Gene:

CA12

Ensembl Gene ID:

ENSAPLG00000003479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003569

7353908 - 7365967

12060