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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7452358_7453269_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7452358 - 7453269

Intron Length:

912

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TCCGTTTCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ACAAACTTAACA

Flanking Amino Acid:

QRFQIMKVDRPYDSLPTSQT

Intron Amino Acid Position:

4800

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.5

39.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

76.9

0.61

0.8

71.5

33.1

Minor 5ss

39.2

-1.2

3.1

48.2

47.4

Minor BPS

60.2

0.32

1.6

64.86

40.8

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959