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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7454624_7454870_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7454624 - 7454870

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCCTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

TTTTGCCTAACA

Flanking Amino Acid:

SGITEENFHEMIPLDSFVGQ

Intron Amino Acid Position:

4647

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

75.9

34.8

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

78.9

0.65

0.9

74.1

35.4

Minor 5ss

38.3

-1.3

3.1

50.9

45.7

Minor BPS

65.9

0.5

2.1

84.22

35.9

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959