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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7455624_7456872_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7455624 - 7456872

Intron Length:

1249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTGATTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TGGTTGTTGATT

Flanking Amino Acid:

FDDTITEMCQELETGVVDLL

Intron Amino Acid Position:

4537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

78.7

29.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

69.3

0.43

1.1

71.8

42.8

Minor 5ss

38.9

-1.3

2.8

48.3

47.4

Minor BPS

50.5

0.1

2.1

70.56

41.2

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959