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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7458294_7459179_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7458294 - 7459179

Intron Length:

886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATACT

5'SS Class:

strong_major

3'SS Sequence:

TACAAATTGTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

TCTGTTACAAAT

Flanking Amino Acid:

YAWGSNSEGQLGLGHTNHVR

Intron Amino Acid Position:

4322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

0.9

79.5

33.5

Major BPS

69.5

0.48

73.5

28.6

Major PPT

61.5

0.26

1.1

58.6

45.7

Minor 5ss

43.8

-0.7

2.7

60.9

43.5

Minor BPS

43.6

-0.4

1.9

61.47

42.7

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959