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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7460242_7460838_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7460242 - 7460838

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTACCCCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATCAT

U12 Branch Point Sequence:

TATCATTTACCC

Flanking Amino Acid:

GNSTAKSSPQKVDILCGIGI

Intron Amino Acid Position:

4231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

85.7

30.3

Major BPS

75.9

0.64

1.1

77.7

35.2

Major PPT

73.3

0.52

0.8

70.9

30.1

Minor 5ss

35.8

-1.6

49.8

46.1

Minor BPS

52.3

0.05

1.8

66.05

39.2

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959