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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7462428_7462883_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7462428 - 7462883

Intron Length:

456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTTTCTTTAATA

Flanking Amino Acid:

HVLTVISALQGFVVTQLVTS

Intron Amino Acid Position:

4077

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.4

45.1

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

83.4

0.75

0.8

81.5

Minor 5ss

35.1

-1.7

3.2

40.3

45.3

Minor BPS

1.19

0.8

91.01

22.8

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959