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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7463794_7463887_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7463794 - 7463887

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTGCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTTTTCTAAAGC

Flanking Amino Acid:

IMSWATSRPEDWHLGGKCDV

Intron Amino Acid Position:

3989

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

1.1

84.4

27.7

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

66.1

0.36

62.3

38.7

Minor 5ss

31.4

-2.1

2.4

41.4

Minor BPS

62.4

0.37

77.35

39.1

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959