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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7463954_7464718_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7463954 - 7464718

Intron Length:

765

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAAATGT

5'SS Class:

major

3'SS Sequence:

TTTTGTTGCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

AATGTCGTAACT

Flanking Amino Acid:

VPEDELTLLMDNSKWINGMD

Intron Amino Acid Position:

3967

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

67.6

38.4

Major BPS

74.6

0.61

65.6

41.4

Major PPT

75.7

0.58

0.9

72.4

37.8

Minor 5ss

39.2

-1.2

3.2

53.4

45.6

Minor BPS

54.3

0.21

2.1

74.86

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959