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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7468716_7469238_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7468716 - 7469238

Intron Length:

523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAACAA

5'SS Class:

major

3'SS Sequence:

AAATAATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TGTTCCATAACT

Flanking Amino Acid:

GWWDQETSAKDGYRKTVDVK

Intron Amino Acid Position:

3728

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

61.1

39.5

Major BPS

0.82

0.8

24.9

Major PPT

0.41

1.1

59.6

44.9

Minor 5ss

29.2

-2.4

3.3

38.1

46.8

Minor BPS

79.3

1.5

94.34

32.3

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959