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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7473550_7475555_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7473550 - 7475555

Intron Length:

2006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

TATCCTGTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATTACTTTATTT

Flanking Amino Acid:

SLQQTCVLNKLEGDSEESLG

Intron Amino Acid Position:

3472

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

30.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

78.9

0.65

0.9

72.2

37.5

Minor 5ss

42.1

-0.9

2.8

43.6

Minor BPS

0.49

1.6

78.87

37.7

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959