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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7478864_7479437_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7478864 - 7479437

Intron Length:

574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATTTG

5'SS Class:

strong_major

3'SS Sequence:

TGTTATTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTTCTTGAACA

Flanking Amino Acid:

NSMEETLMQIGCHGSIEKSS

Intron Amino Acid Position:

3141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.2

33.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

69.5

0.44

1.1

67.7

42.4

Minor 5ss

43.2

-0.7

2.9

57.8

46.8

Minor BPS

80.3

0.95

1.2

88.35

28.3

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959