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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7481015_7481533_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7481015 - 7481533

Intron Length:

519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGAAA

5'SS Class:

major

3'SS Sequence:

TTTTTCCATATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTTCCATATAG

Flanking Amino Acid:

KSKSKTSASERYKGQAPDLI

Intron Amino Acid Position:

3056

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

68.4

38.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

82.1

0.72

0.8

78.1

29.7

Minor 5ss

29.9

-2.3

3.3

39.1

46.3

Minor BPS

54.5

2.1

69.99

42.7

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959