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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7481803_7482979_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7481803 - 7482979

Intron Length:

1177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGTGTGTG

5'SS Class:

major

3'SS Sequence:

TCTGATTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TGCTCTACAACT

Flanking Amino Acid:

IPEVLDWPTWHVCESEDREE

Intron Amino Acid Position:

2967

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

64.9

41.2

Major BPS

76.9

0.67

66.3

40.4

Major PPT

82.5

0.73

0.9

76.5

37.2

Minor 5ss

36.5

-1.5

3.2

39.9

46.1

Minor BPS

53.7

0.19

1.9

73.99

42.7

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959