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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7494314_7494554_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7494314 - 7494554

Intron Length:

241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTTTATA

5'SS Class:

major

3'SS Sequence:

TCTAATATGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATATTCTAATA

Flanking Amino Acid:

SGVEDDQMAQVVERLFLLLS

Intron Amino Acid Position:

1979

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.7

0.37

1.3

72.5

38.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

66.2

0.37

1.1

58.7

45.8

Minor 5ss

40.9

-1

2.5

51.9

44.5

Minor BPS

52.8

0.08

1.6

65.44

34.8

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959