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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7498406_7499338_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7498406 - 7499338

Intron Length:

933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

ATATAATCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATAT

Flanking Amino Acid:

RALQANKHHIEAQQRLLLVT

Intron Amino Acid Position:

1747

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

22.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

68.2

0.41

64.3

41.8

Minor 5ss

-2.1

3.1

39.9

46.1

Minor BPS

65.1

0.55

1.6

84.45

36.3

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959