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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7500272_7509433_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7500272 - 7509433

Intron Length:

9162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TATATATGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TGATTTGAAATT

Flanking Amino Acid:

LDLVSSHRKRGAIHSQVEPL

Intron Amino Acid Position:

1544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

87.9

29.3

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

69.2

0.43

67.1

43.6

Minor 5ss

45.7

-0.5

2.8

45.5

Minor BPS

-0.3

2.2

64.21

41.1

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959