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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7511572_7513289_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7511572 - 7513289

Intron Length:

1718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTGCATGTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTTAA

U12 Branch Point Sequence:

TAGAAGTTAAGA

Flanking Amino Acid:

EREHEVMTAGKIFQCFLSAR

Intron Amino Acid Position:

1384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

79.9

32.8

Major BPS

55.5

0.14

1.1

47.4

37.5

Major PPT

75.3

0.57

68.3

41.9

Minor 5ss

40.2

-1.1

2.8

54.6

37.1

Minor BPS

42.7

-0.5

2.4

54.16

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959