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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7513462_7514750_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7513462 - 7514750

Intron Length:

1289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTAATCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATC

Flanking Amino Acid:

QTRSSSRDRWMLDNQESADI

Intron Amino Acid Position:

1327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.4

45.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.8

0.53

1.1

73.5

40.1

Minor 5ss

35.1

-1.7

3.2

40.3

45.3

Minor BPS

81.7

0.97

0.9

85.33

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959