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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7514872_7514962_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7514872 - 7514962

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTTTAGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTTTTTTCATT

Flanking Amino Acid:

SLLSQACGESRYQPGKALAE

Intron Amino Acid Position:

1286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.1

1.16

0.7

89.2

28.7

Major BPS

100

1.24

0.5

100

Major PPT

76.2

0.59

0.9

35.4

Minor 5ss

25.7

-2.8

3.6

35.8

41.1

Minor BPS

62.8

0.48

1.7

81.14

35.2

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959