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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7518091_7519072_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7518091 - 7519072

Intron Length:

982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CTAATACTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TCATTGCTAATA

Flanking Amino Acid:

EDQELQWPLHGGPELIDPAG

Intron Amino Acid Position:

1116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

83.2

28.5

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

69.6

0.44

0.9

38.2

Minor 5ss

36.4

-1.5

3.3

45.9

43.7

Minor BPS

46.1

-0.3

2.3

59.96

40.5

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959