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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7521637_7522750_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7521637 - 7522750

Intron Length:

1114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGTCA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTATTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATTT

Flanking Amino Acid:

DRWESLSKGQRMQLDIILTS

Intron Amino Acid Position:

883

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.1

0.77

0.8

82.9

32.8

Minor 5ss

35.6

-1.6

3.5

47.4

48.2

Minor BPS

64.7

0.54

1.5

79.8

36.8

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959