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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7524319_7526386_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7524319 - 7526386

Intron Length:

2068

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAACAAT

U12 Branch Point Sequence:

TTTCTTTTTACA

Flanking Amino Acid:

EIPPLPFPSSREHHSFLKLC

Intron Amino Acid Position:

785

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

74.2

37.1

Major BPS

57.4

0.18

1.3

65.4

Major PPT

95.3

1.02

0.5

91.2

20.6

Minor 5ss

45.8

-0.4

2.9

65.2

Minor BPS

63.5

0.42

1.6

76.13

34.5

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959