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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7528008_7528908_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7528008 - 7528908

Intron Length:

901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAAA

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TATTTTGTGACT

Flanking Amino Acid:

SSLALTSTGQVYAWGCGACL

Intron Amino Acid Position:

635

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

74.1

38.3

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

71.1

0.48

43.6

Minor 5ss

37.3

-1.4

3.1

47.6

48.1

Minor BPS

56.5

0.28

78.88

37.7

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959