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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7530103_7531658_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7530103 - 7531658

Intron Length:

1556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

TCTTCACAAAAA

Flanking Amino Acid:

TWGEGDFGRLGHGDSNSRNI

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

84.2

27.6

Major BPS

65.7

0.39

71.3

30.3

Major PPT

80.6

0.69

0.8

80.5

31.5

Minor 5ss

44.8

-0.6

2.8

61.7

43.1

Minor BPS

44.8

-0.4

2.2

62.61

43.1

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959