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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7531756_7532389_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7531756 - 7532389

Intron Length:

634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ACATGTGTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

ATGTAATTAATA

Flanking Amino Acid:

KLIQGPLQGKVVVCVSAGYR

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

0.82

0.8

24.9

Major PPT

61.4

0.26

58.1

42.4

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

56.9

0.21

1.8

68.15

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959