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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7534432_7536200_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7534432 - 7536200

Intron Length:

1769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTAAAAATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TAACACTTAAAA

Flanking Amino Acid:

SILMQMRRSLGSSADRSQWR

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

79.8

35.3

Major BPS

0.87

0.8

85.6

Major PPT

64.1

0.32

56.7

42.9

Minor 5ss

38.1

-1.3

3.1

47.2

43.7

Minor BPS

57.6

0.24

1.6

66.22

38.7

Associated Gene:

Gene:

HERC1

Ensembl Gene ID:

ENSAPLG00000002872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002992

7452172 - 7537130

84959