Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_7588090_7588268_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7588090 - 7588268

Intron Length:

179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGACAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTCCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TGTTGTCTAATT

Flanking Amino Acid:

KRQYARRRWKLSYSIVSFCN

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

64.3

41.7

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

76.9

0.61

0.7

72.3

Minor 5ss

37.4

-1.4

46.9

48.4

Minor BPS

53.3

0.18

2.1

77.07

39.9

Associated Gene:

Gene:

DAPK2

Ensembl Gene ID:

ENSAPLG00000002776

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020535

7587356 - 7631422

44067

ENSAPLT00000002832

7587356 - 7627137

39782