Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_7594323_7596401_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7594323 - 7596401

Intron Length:

2079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

CTGGCTTATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTTCTGATTG

Flanking Amino Acid:

MWSIGVITYILLSGASPFLG

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

36.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

70.5

0.46

61.8

43.6

Minor 5ss

38.9

-1.2

2.7

53.8

42.8

Minor BPS

57.1

0.08

1.8

67.65

40.5

Associated Gene:

Gene:

DAPK2

Ensembl Gene ID:

ENSAPLG00000002776

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020535

7587356 - 7631422

44067

ENSAPLT00000002832

7587356 - 7627137

39782