Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_7598266_7601212_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7598266 - 7601212

Intron Length:

2947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGATG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTATTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

CTTTTGTTATTT

Flanking Amino Acid:

SKKIAHFDLKPENIMLLDKN

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

75.8

39.8

Major BPS

0.72

78.4

31.2

Major PPT

83.2

0.75

0.8

82.1

34.6

Minor 5ss

35.2

-1.7

3.3

47.8

47.9

Minor BPS

49.8

0.07

2.3

74.56

43.3

Associated Gene:

Gene:

DAPK2

Ensembl Gene ID:

ENSAPLG00000002776

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020535

7587356 - 7631422

44067

ENSAPLT00000002832

7587356 - 7627137

39782