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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7601352_7606277_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
7601352 - 7606277

Intron Length:
4926

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTGAGTAAG

5'SS Class:
major

3'SS Sequence:
GTGCATTTTGTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGATAAC

U12 Branch Point Sequence:
TTCTCGTGCATT

Flanking Amino Acid:
NKTDVVLILELVSGGELFDF

Intron Amino Acid Position:
100

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.8
0.49
1.1
67.3
39.4

Major BPS
53.9
0.1
1.2
55.8
37.4

Major PPT
71.7
0.49
0.9
65.7
40.6

Minor 5ss
32.5
-2
2.8
43.3
43.8

Minor BPS
46
-0.2
2.5
72.16
45.3

Associated Gene:

Gene:
DAPK2

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7587356 - 7631422
44067

7587356 - 7627137
39782