Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_7649263_7652057_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7649263 - 7652057

Intron Length:

2795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTAAATTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTCTTTTAAAT

Flanking Amino Acid:

KLKKDLLSQKELVRLLQQTV

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

1.1

77.9

38.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

77.3

0.61

0.9

40.2

Minor 5ss

40.6

-1

2.6

50.6

45.9

Minor BPS

0.77

1.3

86.29

32.9

Associated Gene:

Gene:

TBC1D2B

Ensembl Gene ID:

ENSAPLG00000002740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002788

7638459 - 7662814

24356