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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7743507_7743975_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7743507 - 7743975

Intron Length:
469

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAGATCT

5'SS Class:
strong_major

3'SS Sequence:
ATCTTCTCTTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTAACAT

U12 Branch Point Sequence:
GCTGCTGTGACT

Flanking Amino Acid:
RDFSISGGELGPTMKLKRLT

Intron Amino Acid Position:
647

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
92.3
1
0.8
84.2
27.2

Major BPS
58.7
0.22
1.2
67
38

Major PPT
72.5
0.51
1
76.2
32.1

Minor 5ss
40.6
-1.1
3.1
57.4
46.8

Minor BPS
48.1
-0
2.1
66.97
44.5

Associated Gene:

Gene:
ACSBG1

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7743430 - 7759595
16166

7743430 - 7761138
17709