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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7744923_7747553_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7744923 - 7747553

Intron Length:
2631

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATAAGC

5'SS Class:
strong_major

3'SS Sequence:
TTTCTTCTCCTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTAATAG

U12 Branch Point Sequence:
TTTTTCTTCTCC

Flanking Amino Acid:
GFLYVTGRIKDLIITAGGEN

Intron Amino Acid Position:
518

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.6
0.72
1
71.8
38.2

Major BPS
42.6
-0.4
1.5
38.8
39.8

Major PPT
83.3
0.75
0.7
77.4
31.3

Minor 5ss
33.9
-1.8
2.9
44.3
43

Minor BPS
46.4
-0.2
3.6
77.51
38.8

Associated Gene:

Gene:
ACSBG1

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7743430 - 7759595
16166

7743430 - 7761138
17709