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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7784119_7784743_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7784119 - 7784743

Intron Length:

625

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCTATTTTC

5'SS Class:

weak_major

3'SS Sequence:

CAGGCATATGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

TTTAGTTTAAAC

Flanking Amino Acid:

LNKPFQPIFQFLSDPKKRDL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.5

0.13

1.5

64.6

44.1

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

49.1

-0

1.1

39.6

Minor 5ss

33.3

-1.9

3.9

50.2

39.4

Minor BPS

57.6

0.22

1.9

72.22

38.8

Associated Gene:

Gene:

DNAJA4

Ensembl Gene ID:

ENSAPLG00000001467

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001647

7784004 - 7788118

4115