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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7784897_7785829_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7784897 - 7785829

Intron Length:

933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACACAGT

5'SS Class:

major

3'SS Sequence:

CTGTTTTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATT

Flanking Amino Acid:

GGGRMNRERRGKNVVHQLGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

1.1

66.2

45.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.5

0.48

70.8

38.9

Minor 5ss

39.4

-1.2

3.3

46.3

Minor BPS

0.96

86.64

33.8

Associated Gene:

Gene:

DNAJA4

Ensembl Gene ID:

ENSAPLG00000001467

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001647

7784004 - 7788118

4115