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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7785935_7786709_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7785935 - 7786709

Intron Length:

775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

TCACCTTTAACT

Flanking Amino Acid:

QKNVICGKCEGYGGKRGAVE

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

77.3

0.68

79.3

29.4

Major PPT

73.5

0.53

1.1

74.1

34.5

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

0.86

1.2

82.24

Associated Gene:

Gene:

DNAJA4

Ensembl Gene ID:

ENSAPLG00000001467

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001647

7784004 - 7788118

4115