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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7786938_7787016_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7786938 - 7787016

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTCTGTTGAGA

Flanking Amino Acid:

KKIIEVHVDKGMKDGQKIVF

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

74.6

28.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

92.8

0.96

0.6

88.9

20.3

Minor 5ss

25.3

-2.8

3.2

31.7

42.9

Minor BPS

45.6

-0.3

2.3

61.3

38.9

Associated Gene:

Gene:

DNAJA4

Ensembl Gene ID:

ENSAPLG00000001467

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001647

7784004 - 7788118

4115