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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7787248_7787719_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7787248 - 7787719

Intron Length:

472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GACCTTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

AACTCCTGACCT

Flanking Amino Acid:

NRVLVISSRPGEVVKHGDLK

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.8

38.5

Major BPS

72.5

0.56

1.2

39.9

Major PPT

70.4

0.46

64.7

Minor 5ss

38.8

-1.3

3.4

58.1

46.5

Minor BPS

0.3

1.8

72.62

43.8

Associated Gene:

Gene:

DNAJA4

Ensembl Gene ID:

ENSAPLG00000001467

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001647

7784004 - 7788118

4115