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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7858342_7860191_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7858342 - 7860191

Intron Length:

1850

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACACCT

5'SS Class:

major

3'SS Sequence:

TTTTATATTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TCATGTTTAAAT

Flanking Amino Acid:

DHSLQIDFSKCAIQNTPNPG

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.2

61.7

42.8

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

0.83

0.8

81.3

34.8

Minor 5ss

40.3

-1.1

3.2

55.3

42.8

Minor BPS

57.4

0.31

1.9

73.64

43.3

Associated Gene:

Gene:

IREB2

Ensembl Gene ID:

ENSAPLG00000016388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026271

7853160 - 7875367

22208

ENSAPLT00000017108

7852631 - 7875367

22737