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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7871955_7873082_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7871955 - 7873082

Intron Length:

1128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTATTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCCCTTCTAAAT

Flanking Amino Acid:

SAAAKYLTNKGLTPREFNSY

Intron Amino Acid Position:

777

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

80.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.7

0.74

0.8

78.4

34.8

Minor 5ss

56.3

0.21

2.4

44.2

Minor BPS

47.2

-0.1

1.7

62.47

41.8

Associated Gene:

Gene:

IREB2

Ensembl Gene ID:

ENSAPLG00000016388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026271

7853160 - 7875367

22208

ENSAPLT00000017108

7852631 - 7875367

22737