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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7882525_7885008_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7882525 - 7885008

Intron Length:

2484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ACTTTTTCTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTCTTGTACT

Flanking Amino Acid:

AASLDKALTEKFHHPSVKSL

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.5

0.55

75.1

33.1

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

60.5

0.41

1.8

80.62

41.2

Associated Gene:

Gene:

HYKK

Ensembl Gene ID:

ENSAPLG00000016369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017082

7881377 - 7886829

5453