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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7891079_7891571_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7891079 - 7891571

Intron Length:

493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

CCATATGTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TGTTCCATATGT

Flanking Amino Acid:

MDVSKLSAEKVEIATLTREN

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

72.6

0.51

68.7

41.5

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

51.6

0.13

2.2

77.83

44.1

Associated Gene:

Gene:

PSMA4

Ensembl Gene ID:

ENSAPLG00000016347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017063

7886833 - 7891726

4894