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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7907366_7908754_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7907366 - 7908754

Intron Length:

1389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CATGCATCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTTTTTCATTT

Flanking Amino Acid:

LMTTNVWLKQEWIDVKLRWN

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.6

Major BPS

100

1.24

0.5

100

Major PPT

70.4

0.46

0.9

61.9

38.7

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

52.6

0.16

1.7

73.71

37.9

Associated Gene:

Gene:

CHRNA5

Ensembl Gene ID:

ENSAPLG00000016223

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016933

7898145 - 7914009

15865

ENSAPLT00000032759

7905971 - 7914009

8039