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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7929369_7931430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7929369 - 7931430

Intron Length:

2062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ATACCTTTAATT

Flanking Amino Acid:

HMKSDDNDQSVIEDWKYVAM

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

76.2

34.7

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

-1.5

2.8

43.1

43.9

Minor BPS

72.8

0.79

1.1

80.82

34.5

Associated Gene:

Gene:

CHRNB4

Ensembl Gene ID:

ENSAPLG00000016042

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016743

7929228 - 7941393

12166

ENSAPLT00000021132

7929228 - 7937240

8013