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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7935781_7936635_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7935781 - 7936635

Intron Length:

855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCTCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TTTCAGAGGACA

Flanking Amino Acid:

QVSLAQLISVNEREQIMTTN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.3

36.4

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

83.6

0.76

0.7

77.7

24.2

Minor 5ss

44.3

-0.6

2.8

53.8

44.4

Minor BPS

39.4

-0.8

2.4

59.17

39.8

Associated Gene:

Gene:

CHRNB4

Ensembl Gene ID:

ENSAPLG00000016042

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016743

7929228 - 7941393

12166

ENSAPLT00000021132

7929228 - 7937240

8013