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Intron Name: Anas_platyrhynchos_platyrhynchos_11_7936782_7937111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

7936782 - 7937111

Intron Length:

330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TGATGTTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACGTGAT

U12 Branch Point Sequence:

TGATGTTTTACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

78.3

32.5

Major BPS

59.9

0.25

1.2

51.1

44.3

Major PPT

0.65

72.4

42.4

Minor 5ss

37.9

-1.4

3.2

51.5

45.7

Minor BPS

49.6

-0

2.1

64.53

41.6

Associated Gene:

Gene:

CHRNB4

Ensembl Gene ID:

ENSAPLG00000016042

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021132

7929228 - 7937240

8013