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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8230254_8239976_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8230254 - 8239976

Intron Length:

9723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GTTTCTTTGACA

Flanking Amino Acid:

ICQLCFAVNGRSWNIFDNTR

Intron Amino Acid Position:

1073

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

81.8

0.79

1.1

34.5

Major PPT

79.4

0.66

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

79.8

0.93

83.15

30.6

Associated Gene:

Gene:

SCAPER

Ensembl Gene ID:

ENSAPLG00000014716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015367

8204332 - 8358959

154628